MongoDB + Parquet analytics for NCBI BioSample/BioProject/SRA and NMDC submission-portal metadata. Environmental triad annotation, harmonized-attribute counts, measurement discovery, value-set voting sheets.

Runtime system for NMDC data management and orchestration

Data portal client and server for NMDC.

A python client for interacting with the NMDC (National Microbiome Data Collaborative) runtime API.

National Microbiome Data Collaborative (NMDC) unified data model

A repository to that holds the code for the NMDC Submission portal metadata suggestor tool, powered by AI

NMDC data processing system for metabolomics, lipidomics, and NOM data. Workflow and metadata manager.

Framework and data for performing evaluations for AI-powered NMDC tools.

Iterative agent that maps arbitrary spreadsheets to the nmdc-submission-schema

The NMDC submission schema