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1. sleep_scoring sleep_scoring Public

   An easy-to-use app that provides 1) interactive visualization of EEG, EMG, and/or Norepinephrine recordings of mice, 2) automated sleep scoring, 3) allows user annotation or correction, 4) post-sle…

   Python 3

2. vessel-diameter-and-pulsatility-analysis-app vessel-diameter-and-pulsatility-analysis-app Public

   An app to calculate and visualize blood vessel diameter and area as functions of time, given .tif, .lif, or .mat files

   MATLAB

3. fp_analysis fp_analysis Public

   An app that visualizes up to four channels of fiberphotometry signals and provides statistical analyses on predefined events or periods.

   Python

4. biosignal_preprocessing_app biosignal_preprocessing_app Public

   Provides a unified pipeline under a simple GUI to extract and synchronize biosignals including EEG, EMG, and fiberphotometry data recorded by TDT, Viewpoint, or Pinnacle., and outputs a .mat file.

   MATLAB

5. pupil_tracking pupil_tracking Public

   A mouse pupil size analysis pipeline in a single line of command. Works well in low-contrast and low-resolution frames.

   Python

6. BrainFlowZZZ_metadata_wizard BrainFlowZZZ_metadata_wizard Public

   MATLAB 1