Search PubMed/Europe PMC, fetch articles and full text (PMC/EPMC/Unpaywall), citations, MeSH terms via MCP. STDIO or Streamable HTTP.

R Interface to Europe PMC RESTful Web Service

Open-source AI research assistant for VS Code + GitHub Copilot. Connects to PubMed, OpenAlex, Semantic Scholar, Europe PMC, CrossRef, and Zotero via MCP servers. Custom agents guide systematic reviews, academic writing, data analysis, and project management — all ICMJE-compliant with full audit trails.

🔬 Professional MCP server for biomedical literature research — 40 tools, multi-source search (PubMed, Europe PMC, CORE, OpenAlex), full-text access, citation networks, PICO analysis, and more

Information extraction from unstructured text to build a knowledge graph using techniques from traditional NLP to pre-trained transformers and LLMs for NER and Linking, and Relation Extraction.

A Java command-line tool and library to download and store publications with metadata by combining content from various online resources

QTLTableMiner++ tool for mining tables in scientific articles

Tool for visualization of research papers that have common accession numbers

NLP-powered tool to discover and classify biodiversity genomics publications using Europe PMC API

Code associated with our 2018 review in Current Opinion in Systems Biology

A minimal search interface to Europe PMC

📚 LitRadar — 生物医学文献追踪系统 | 鸿蒙PC纯原生 | PubMed + Europe PMC 直连 | 零后端 | ArkTS

Local research-only AI agent for evidence-grounded therapeutic target discovery with PubTator3, Open Targets, Neo4j, ChEMBL/RDKit, and FastAPI.

Python package for existence checks, metadata, linking, and conversion of scholarly identifiers (PMID, DOI, PMCID, arXiv, ORCID).