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Work on introduction.
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analysis/reproducibility.Rmd

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# Reproducibility is difficult
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----------
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![](assets/phd031214s.gif)
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["Scratch"](http://phdcomics.com/comics.php?f=1689
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) by Jorge Cham ([www.phdcomics.com](www.phdcomics.com/))
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## The study results are discouraging
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![](assets/ioannidis-2009-fig-1.png)
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[Ioannidis et al., 2009](http://www.ncbi.nlm.nih.gov/pubmed/19174838)
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## Every step helps
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![](assets/peng-2011-fig-01.jpg)
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[Peng, 2011](https://pubmed.ncbi.nlm.nih.gov/22144613/)
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# Literate programming with R Markdown
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# Version control with Git

code/create-slides.R

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#!/usr/bin/env Rscript
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rmarkdown::render(
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input = "analysis/reproducibility.Rmd",
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output_format = rmarkdown::ioslides_presentation(
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widescreen = TRUE
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),
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output_file = "reproducibility-slides.html",
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output_dir = "docs/"
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)

docs/assets/ioannidis-2009-fig-1.png

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docs/assets/peng-2011-fig-01.jpg

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docs/assets/phd031214s.gif

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