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julielangoujulielangou
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Porting ScaLAPACK on CMAKE.
What I can say is that it is working on my Mac, that's a start. Need further tests.
1 parent fb52302 commit a329ce8

34 files changed

+1636
-9
lines changed

‎BLACS/CMakeLists.txt

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@@ -0,0 +1,4 @@
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add_subdirectory(SRC)
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if(BUILD_TESTING)
3+
add_subdirectory(TESTING)
4+
endif(BUILD_TESTING)

‎BLACS/INSTALL/CMakeLists.txt

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cmake_minimum_required(VERSION 2.6)
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project(INSTALL C Fortran)
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add_executable(xintface Fintface.f Cintface.c)

‎BLACS/INSTALL/Cintface.c

Lines changed: 4 additions & 4 deletions
Original file line numberDiff line numberDiff line change
@@ -2,20 +2,20 @@
22

33
void c_intface_(int *i)
44
{
5-
fprintf(stderr, "For this platform, set INTFACE = -DAdd_\n");
5+
fprintf(stdout, "Add_\n");
66
}
77

88
void c_intface(int *i)
99
{
10-
fprintf(stderr, "For this platform, set INTFACE = -DNoChange\n");
10+
fprintf(stdout, "NoChange\n");
1111
}
1212

1313
void c_intface__(int *i)
1414
{
15-
fprintf(stderr, "For this platform, set INTFACE = -Df77IsF2C\n");
15+
fprintf(stdout, "f77IsF2C\n");
1616
}
1717

1818
void C_INTFACE(int *i)
1919
{
20-
fprintf(stderr, "For this platform, set INTFACE = -DUpCase\n");
20+
fprintf(stdout, "UpCase\n");
2121
}

‎BLACS/INSTALL/cmake_install.cmake

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# Install script for directory: /Users/julie/Documents/Boulot/scalapack-dev/scalapack/trunk/BLACS/INSTALL
2+
3+
# Set the install prefix
4+
IF(NOT DEFINED CMAKE_INSTALL_PREFIX)
5+
SET(CMAKE_INSTALL_PREFIX "/usr/local")
6+
ENDIF(NOT DEFINED CMAKE_INSTALL_PREFIX)
7+
STRING(REGEX REPLACE "/$" "" CMAKE_INSTALL_PREFIX "${CMAKE_INSTALL_PREFIX}")
8+
9+
# Set the install configuration name.
10+
IF(NOT DEFINED CMAKE_INSTALL_CONFIG_NAME)
11+
IF(BUILD_TYPE)
12+
STRING(REGEX REPLACE "^[^A-Za-z0-9_]+" ""
13+
CMAKE_INSTALL_CONFIG_NAME "${BUILD_TYPE}")
14+
ELSE(BUILD_TYPE)
15+
SET(CMAKE_INSTALL_CONFIG_NAME "")
16+
ENDIF(BUILD_TYPE)
17+
MESSAGE(STATUS "Install configuration: \"${CMAKE_INSTALL_CONFIG_NAME}\"")
18+
ENDIF(NOT DEFINED CMAKE_INSTALL_CONFIG_NAME)
19+
20+
# Set the component getting installed.
21+
IF(NOT CMAKE_INSTALL_COMPONENT)
22+
IF(COMPONENT)
23+
MESSAGE(STATUS "Install component: \"${COMPONENT}\"")
24+
SET(CMAKE_INSTALL_COMPONENT "${COMPONENT}")
25+
ELSE(COMPONENT)
26+
SET(CMAKE_INSTALL_COMPONENT)
27+
ENDIF(COMPONENT)
28+
ENDIF(NOT CMAKE_INSTALL_COMPONENT)
29+
30+
IF(CMAKE_INSTALL_COMPONENT)
31+
SET(CMAKE_INSTALL_MANIFEST "install_manifest_${CMAKE_INSTALL_COMPONENT}.txt")
32+
ELSE(CMAKE_INSTALL_COMPONENT)
33+
SET(CMAKE_INSTALL_MANIFEST "install_manifest.txt")
34+
ENDIF(CMAKE_INSTALL_COMPONENT)
35+
36+
FILE(WRITE "/Users/julie/Documents/Boulot/scalapack-dev/scalapack/trunk/BLACS/INSTALL/${CMAKE_INSTALL_MANIFEST}" "")
37+
FOREACH(file ${CMAKE_INSTALL_MANIFEST_FILES})
38+
FILE(APPEND "/Users/julie/Documents/Boulot/scalapack-dev/scalapack/trunk/BLACS/INSTALL/${CMAKE_INSTALL_MANIFEST}" "${file}\n")
39+
ENDFOREACH(file)

‎BLACS/Makefile

Lines changed: 2 additions & 2 deletions
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@@ -6,7 +6,7 @@ clean:
66
( cd INSTALL; make clean )
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88
tester :
9-
( cd TESTING ; make $(what) )
9+
( cd TESTING ; make )
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1111
lib :
12-
( cd SRC ; make $(what) )
12+
( cd SRC ; make )

‎BLACS/SRC/CMakeLists.txt

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# --------------------------
2+
# The communication routines
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# --------------------------
4+
set (comm
5+
igesd2d_.c sgesd2d_.c dgesd2d_.c cgesd2d_.c zgesd2d_.c
6+
itrsd2d_.c strsd2d_.c dtrsd2d_.c ctrsd2d_.c ztrsd2d_.c
7+
igerv2d_.c sgerv2d_.c dgerv2d_.c cgerv2d_.c zgerv2d_.c
8+
itrrv2d_.c strrv2d_.c dtrrv2d_.c ctrrv2d_.c ztrrv2d_.c
9+
igebs2d_.c sgebs2d_.c dgebs2d_.c cgebs2d_.c zgebs2d_.c
10+
igebr2d_.c sgebr2d_.c dgebr2d_.c cgebr2d_.c zgebr2d_.c
11+
itrbs2d_.c strbs2d_.c dtrbs2d_.c ctrbs2d_.c ztrbs2d_.c
12+
itrbr2d_.c strbr2d_.c dtrbr2d_.c ctrbr2d_.c ztrbr2d_.c
13+
igsum2d_.c sgsum2d_.c dgsum2d_.c cgsum2d_.c zgsum2d_.c
14+
igamx2d_.c sgamx2d_.c dgamx2d_.c cgamx2d_.c zgamx2d_.c
15+
igamn2d_.c sgamn2d_.c dgamn2d_.c cgamn2d_.c zgamn2d_.c)
16+
17+
# --------------------
18+
# The support routines
19+
# --------------------
20+
set (supp
21+
blacs_setup_.c blacs_set_.c blacs_get_.c
22+
blacs_abort_.c blacs_exit_.c blacs_pnum_.c blacs_pcoord_.c
23+
ksendid_.c krecvid_.c kbsid_.c kbrid_.c
24+
dcputime00_.c dwalltime00_.c blacs_pinfo_.c
25+
blacs_init_.c blacs_map_.c blacs_free_.c blacs_grid_.c blacs_info_.c
26+
blacs_barr_.c sys2blacs_.c blacs2sys_.c free_handle_.c)
27+
28+
# ---------------------
29+
# The internal routines
30+
# ---------------------
31+
set (internal
32+
BI_HypBS.c BI_HypBR.c BI_IdringBS.c BI_IdringBR.c
33+
BI_MpathBS.c BI_MpathBR.c BI_SringBS.c BI_SringBR.c
34+
BI_TreeBS.c BI_TreeBR.c
35+
BI_Ssend.c BI_Rsend.c BI_Srecv.c BI_Asend.c BI_Arecv.c
36+
BI_TreeComb.c BI_BeComb.c BI_MringComb.c
37+
BI_ArgCheck.c BI_TransDist.c BI_GetBuff.c BI_UpdateBuffs.c
38+
BI_EmergencyBuff.c BI_BlacsErr.c BI_BlacsWarn.c BI_BlacsAbort.c
39+
BI_BuffIsFree.c BI_imvcopy.c BI_smvcopy.c BI_dmvcopy.c
40+
BI_ivmcopy.c BI_svmcopy.c BI_dvmcopy.c
41+
BI_Pack.c BI_Unpack.c BI_GetMpiGeType.c BI_GetMpiTrType.c
42+
BI_ivvsum.c BI_svvsum.c BI_dvvsum.c BI_cvvsum.c BI_zvvsum.c
43+
BI_ivvamx.c BI_svvamx.c BI_dvvamx.c BI_cvvamx.c BI_zvvamx.c
44+
BI_ivvamx2.c BI_svvamx2.c BI_dvvamx2.c BI_cvvamx2.c BI_zvvamx2.c
45+
BI_ivvamn.c BI_svvamn.c BI_dvvamn.c BI_cvvamn.c BI_zvvamn.c
46+
BI_ivvamn2.c BI_svvamn2.c BI_dvvamn2.c BI_cvvamn2.c BI_zvvamn2.c
47+
BI_iMPI_amx.c BI_sMPI_amx.c BI_dMPI_amx.c BI_cMPI_amx.c
48+
BI_zMPI_amx.c BI_iMPI_amx2.c BI_sMPI_amx2.c BI_dMPI_amx2.c
49+
BI_cMPI_amx2.c BI_zMPI_amx2.c BI_iMPI_amn.c BI_sMPI_amn.c
50+
BI_dMPI_amn.c BI_cMPI_amn.c BI_zMPI_amn.c BI_iMPI_amn2.c
51+
BI_sMPI_amn2.c BI_dMPI_amn2.c BI_cMPI_amn2.c BI_zMPI_amn2.c
52+
BI_cMPI_sum.c BI_zMPI_sum.c BI_ContxtNum.c BI_GlobalVars.c
53+
BI_TransUserComm.c )
54+
55+
56+
#
57+
# Note on CMAKE (from Brad - Kitware)
58+
#
59+
#CMake hides the intermediate object files from its interface so there is
60+
#no direct way to do this within a single target. This limitation comes
61+
#from the requirement to support generation of build systems like VS IDE
62+
#project files that do not expose object files explicitly.
63+
64+
# Solution 1 : Build separate libraries, one for each block of objects
65+
#set(blacsFint ${comm} ${supp})
66+
#add_library(blacsCint ${comm} ${supp})
67+
#set_property(TARGET blacsCint PROPERTY COMPILE_DEFINITIONS CallFromC)
68+
#add_library(scalapack ${internal} ${blacsFint})
69+
#target_link_libraries(scalapack blacsCint)
70+
71+
# Solution 2 : Create an extra source file that #include-s the original one
72+
set(srcs ${comm} ${supp})
73+
set(srcs_C)
74+
foreach(src ${srcs})
75+
# string(REPLACE ".c" "-C.c" src_C "${CMAKE_CURRENT_BINARY_DIR}/${src}")
76+
string(REPLACE ".c" "-C.c" src_C "${src}")
77+
configure_file(src-C.c.in ${src_C} @ONLY)
78+
list(APPEND srcs_C ${src_C})
79+
endforeach()
80+
81+
set(blacs ${srcs} ${srcs_C} ${internal})
82+
#add_library(scalapack ${srcs} ${srcs_C} ${internal})
83+
#scalapack_install_library(scalapack)
84+

‎BLACS/SRC/src-C.c.in

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1+
#define CallFromC
2+
#include "@CMAKE_CURRENT_SOURCE_DIR@/@src@"

‎BLACS/TESTING/CMakeLists.txt

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1+
set(FTestObj
2+
BLACStest.f btprim.f tools.f)
3+
4+
add_executable(xFbtest ${FTestObj})
5+
target_link_libraries(xFbtest scalapack)
6+
7+
set(CTestObj
8+
Cbt.c)
9+
10+
set_property(
11+
SOURCE Cbt.c
12+
APPEND PROPERTY COMPILE_DEFINITIONS BTCINTFACE
13+
)
14+
15+
add_executable(xCbtest ${CTestObj} ${FTestObj})
16+
target_link_libraries(xCbtest scalapack)
17+
18+
file(COPY bsbr.dat DESTINATION ${CMAKE_RUNTIME_OUTPUT_DIRECTORY})
19+
file(COPY bt.dat DESTINATION ${CMAKE_RUNTIME_OUTPUT_DIRECTORY})
20+
file(COPY comb.dat DESTINATION ${CMAKE_RUNTIME_OUTPUT_DIRECTORY})
21+
file(COPY sdrv.dat DESTINATION ${CMAKE_RUNTIME_OUTPUT_DIRECTORY})
22+
23+
# We could run the BLACS TESTING the following way
24+
# But BLACS TESTING are TESTING anormal exit so even if they pass,
25+
# CTest will determine they fail
26+
#add_test(xFbtest0 ${MPIEXEC} ${MPIEXEC_NUMPROC_FLAG} 4 ./xFbtest)
27+
#add_test(xCbtest0 ${MPIEXEC} ${MPIEXEC_NUMPROC_FLAG} 4 ./xCbtest)
28+
29+
add_test(xCbtest
30+
${CMAKE_COMMAND}
31+
-DMPIEXEC=${MPIEXEC}
32+
-DMPIEXEC_NUMPROC_FLAG=${MPIEXEC_NUMPROC_FLAG}
33+
-DTEST_PROG=xCbtest
34+
-DOUTPUTDIR=${SCALAPACK_BINARY_DIR}/BLACS/TESTING
35+
-DRUNTIMEDIR=${CMAKE_RUNTIME_OUTPUT_DIRECTORY}
36+
-DSOURCEDIR=${CMAKE_CURRENT_SOURCE_DIR}
37+
-P ${CMAKE_CURRENT_SOURCE_DIR}/runtest.cmake
38+
)
39+
40+
add_test(xFbtest
41+
${CMAKE_COMMAND}
42+
-DMPIEXEC=${MPIEXEC}
43+
-DMPIEXEC_NUMPROC_FLAG=${MPIEXEC_NUMPROC_FLAG}
44+
-DTEST_PROG=xFbtest
45+
-DOUTPUTDIR=${SCALAPACK_BINARY_DIR}/BLACS/TESTING
46+
-DRUNTIMEDIR=${CMAKE_RUNTIME_OUTPUT_DIRECTORY}
47+
-DSOURCEDIR=${CMAKE_CURRENT_SOURCE_DIR}
48+
-P ${CMAKE_CURRENT_SOURCE_DIR}/runtest.cmake
49+
)

‎BLACS/TESTING/runtest.cmake

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message("Running BLACS TESTS")
2+
message(STATUS "${MPIEXEC} ${MPIEXEC_NUMPROC_FLAG} 4 ./${TEST_PROG}")
3+
message(STATUS "Output out_${TEST_PROG}.txt")
4+
file(COPY ${RUNTIMEDIR}/${TEST_PROG} DESTINATION ${OUTPUTDIR})
5+
6+
execute_process(COMMAND ${MPIEXEC} ${MPIEXEC_NUMPROC_FLAG} 4 ./${TEST_PROG}
7+
OUTPUT_FILE "out_${TEST_PROG}.txt"
8+
ERROR_FILE "error_${TEST_PROG}.txt"
9+
RESULT_VARIABLE HAD_ERROR)
10+
11+
if(HAD_ERROR)
12+
# This is normal to exit in Error (good behaviour)
13+
# So we are going to check that the output have the last line of the testing : DONE BLACS_GRIDEXIT
14+
file(READ "out_${TEST_PROG}.txt" TESTSTRING)
15+
16+
STRING(REPLACE "DONE BLACS_GRIDEXIT" "BLACS OK" tmp ${TESTSTRING})
17+
18+
if("${tmp}" STREQUAL "${TESTSTRING}")
19+
message( STATUS "Error in error_${TEST_PROG}.txt")
20+
message(FATAL_ERROR "Test failed - Test did not reach DONE BLACS_GRIDEXIT")
21+
else()
22+
message( STATUS "Test Passed")
23+
endif()
24+
endif()

‎CMAKE/CTestCustom.cmake.in

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#
2+
# For further details regarding this file,
3+
# see http://www.vtk.org/Wiki/CMake_Testing_With_CTest#Customizing_CTest
4+
#
5+
6+
SET(CTEST_CUSTOM_MAXIMUM_PASSED_TEST_OUTPUT_SIZE 0)
7+
SET(CTEST_CUSTOM_MAXIMUM_FAILED_TEST_OUTPUT_SIZE 0)
8+
SET(CTEST_CUSTOM_MAXIMUM_NUMBER_OF_ERRORS 500)
9+
SET(CTEST_CUSTOM_MAXIMUM_NUMBER_OF_WARNINGS 500)
10+
11+
# Files to explicitly exclude from code coverage
12+
SET(CTEST_CUSTOM_COVERAGE_EXCLUDE
13+
${CTEST_CUSTOM_COVERAGE_EXCLUDE}
14+
15+
# Exclude the testing code itself from code coverage
16+
"/TESTING/"
17+
)
18+
19+
# Warnings to explicitly ignore
20+
SET(CTEST_CUSTOM_WARNING_EXCEPTION
21+
${CTEST_CUSTOM_WARNING_EXCEPTION}
22+
23+
# Common warning when linking ATLAS built with GNU Fortran 4.1 and building
24+
# with GNU Fortran 4.4. It can be safely ignored.
25+
"libgfortran.*may conflict with libgfortran"
26+
27+
# Harmless warning often seen on IRIX
28+
"WARNING 84 : .*libm.* is not used for resolving any symbol"
29+
30+
# Warnings caused by sun compilers when building code to only run on your
31+
# native platform
32+
"xarch=native on this architecture implies -xarch=.*which generates code that does not run"
33+
34+
# Harmless warnings from the Intel compiler on Windows
35+
"ipo: warning #11010: file format not recognized for .*\\.exe\\.embed\\.manifest\\.res"
36+
"LINK : warning LNK4224: /INCREMENTAL:YES is no longer supported; ignored"
37+
38+
# Warnings caused by string truncation in the test code. The truncation is
39+
# intentional
40+
"Character string truncated to length 1 on assignment"
41+
)
42+

‎CMAKE/CheckBLACSCompilerFlags.cmake

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1+
# This module checks against various known compilers and thier respective
2+
# flags to determine any specific flags needing to be set.
3+
#
4+
# 1. If FPE traps are enabled either abort or disable them
5+
# 2. Specify fixed form if needed
6+
# 3. Ensure that Release builds use O2 instead of O3
7+
#
8+
#=============================================================================
9+
# Author: Chuck Atkins
10+
# Copyright 2011
11+
#=============================================================================
12+
13+
macro( CheckBLACSCompilerFlags )
14+
15+
set( FPE_EXIT FALSE )
16+
17+
# GNU Fortran
18+
if( CMAKE_Fortran_COMPILER_ID STREQUAL "GNU" )
19+
if( "${CMAKE_Fortran_FLAGS}" MATCHES "-ffpe-trap=[izoupd]")
20+
set( FPE_EXIT TRUE )
21+
endif()
22+
23+
# Intel Fortran
24+
elseif( CMAKE_Fortran_COMPILER_ID STREQUAL "Intel" )
25+
if( "${CMAKE_Fortran_FLAGS}" MATCHES "[-/]fpe(-all=|)0" )
26+
set( FPE_EXIT TRUE )
27+
endif()
28+
29+
# SunPro F95
30+
elseif( CMAKE_Fortran_COMPILER_ID STREQUAL "SunPro" )
31+
if( ("${CMAKE_Fortran_FLAGS}" MATCHES "-ftrap=") AND
32+
NOT ("${CMAKE_Fortran_FLAGS}" MATCHES "-ftrap=(%|)none") )
33+
set( FPE_EXIT TRUE )
34+
elseif( NOT (CMAKE_Fortran_FLAGS MATCHES "-ftrap=") )
35+
message( STATUS "Disabling FPE trap handlers with -ftrap=%none" )
36+
set( CMAKE_Fortran_FLAGS "${CMAKE_Fortran_FLAGS} -ftrap=%none"
37+
CACHE STRING "Flags for Fortran compiler." FORCE )
38+
endif()
39+
40+
# IBM XL Fortran
41+
elseif( (CMAKE_Fortran_COMPILER_ID STREQUAL "VisualAge" ) OR # CMake 2.6
42+
(CMAKE_Fortran_COMPILER_ID STREQUAL "XL" ) ) # CMake 2.8
43+
if( "${CMAKE_Fortran_FLAGS}" MATCHES "-qflttrap=[a-zA-Z:]:enable" )
44+
set( FPE_EXIT TRUE )
45+
endif()
46+
47+
if( NOT ("${CMAKE_Fortran_FLAGS}" MATCHES "-qfixed") )
48+
message( STATUS "Enabling fixed format F90/F95 with -qfixed" )
49+
set( CMAKE_Fortran_FLAGS "${CMAKE_Fortran_FLAGS} -qfixed"
50+
CACHE STRING "Flags for Fortran compiler." FORCE )
51+
endif()
52+
53+
# HP Fortran
54+
elseif( CMAKE_Fortran_COMPILER_ID STREQUAL "HP" )
55+
if( "${CMAKE_Fortran_FLAGS}" MATCHES "\\+fp_exception" )
56+
set( FPE_EXIT TRUE )
57+
endif()
58+
59+
if( NOT ("${CMAKE_Fortran_FLAGS}" MATCHES "\\+fltconst_strict") )
60+
message( STATUS "Enabling strict float conversion with +fltconst_strict" )
61+
set( CMAKE_Fortran_FLAGS "${CMAKE_Fortran_FLAGS} +fltconst_strict"
62+
CACHE STRING "Flags for Fortran compiler." FORCE )
63+
endif()
64+
65+
# Most versions of cmake don't have good default options for the HP compiler
66+
set( CMAKE_Fortran_FLAGS_DEBUG "${CMAKE_Fortran_FLAGS_DEBUG} -g"
67+
CACHE STRING "Flags used by the compiler during debug builds" FORCE )
68+
set( CMAKE_Fortran_FLAGS_DEBUG "${CMAKE_Fortran_FLAGS_MINSIZEREL} +Osize"
69+
CACHE STRING "Flags used by the compiler during release minsize builds" FORCE )
70+
set( CMAKE_Fortran_FLAGS_DEBUG "${CMAKE_Fortran_FLAGS_RELEASE} +O2"
71+
CACHE STRING "Flags used by the compiler during release builds" FORCE )
72+
set( CMAKE_Fortran_FLAGS_DEBUG "${CMAKE_Fortran_FLAGS_RELWITHDEBINFO} +O2 -g"
73+
CACHE STRING "Flags used by the compiler during release with debug info builds" FORCE )
74+
else()
75+
endif()
76+
77+
if( "${CMAKE_Fortran_FLAGS_RELEASE}" MATCHES "O[3-9]" )
78+
message( STATUS "Reducing RELEASE optimization level to O2" )
79+
string( REGEX REPLACE "O[3-9]" "O2" CMAKE_Fortran_FLAGS_RELEASE
80+
"${CMAKE_Fortran_FLAGS_RELEASE}" )
81+
set( CMAKE_Fortran_FLAGS_RELEASE "${CMAKE_Fortran_FLAGS_RELEASE}"
82+
CACHE STRING "Flags used by the compiler during release builds" FORCE )
83+
endif()
84+
85+
86+
if( FPE_EXIT )
87+
message( FATAL_ERROR "Floating Point Exception (FPE) trap handlers are currently explicitly enabled in the compiler flags. BLACS is designed to check for and handle these cases internally and enabling these traps will likely cause BLACS to crash. Please re-configure with floating point exception trapping disabled." )
88+
endif()
89+
90+
endmacro()

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