@@ -75,9 +75,6 @@ format (Figure 2), including:
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- A :ref: `grouping file <v2_problem_yaml >` that lists all relevant files and
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provides additional information including extensions [YAML].
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- - (optional) A simulation file, which has the same format as the measurement
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- file, but containing data generated by model simulations [TSV].
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-
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- (optional) A :ref: `mapping file <v2_mapping_table >` which allows mapping
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PEtab entity IDs to entity IDs in the model, which might not have valid
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PEtab IDs themselves, and to provide additional annotations [TSV].
@@ -542,6 +539,20 @@ Detailed field description
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For problems with a single model, this column is ignored, and the same model
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is used for all simulations.
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+ .. _v2_simulation_table :
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+
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+ Simulation table
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+ ~~~~~~~~~~~~~~~~
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+
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+ For some applications, it is useful to provide a simulation file that contains
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+ the simulation results of the model for the same time points as the
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+ measurements. This is useful, for example, for comparing the simulation results
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+ with the measurements, or for assessing simulation reproducibility across tools.
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+ The simulation table is provided as a tab-separated values (TSV) file with
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+ the same structure as the measurement table, only that the
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+ ``measurement `` column is replaced by the ``simulation `` column that contains
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+ the simulation results.
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+
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.. _v2_observables_table :
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