ISMB.OSCA/DESCRIPTION at devel · Bioconductor/ISMB.OSCA · GitHub

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Package: ISMB.OSCA
Title: Orchestrating Large-Scale Single-Cell Analysis with Bioconductor
Version: 0.99.14
Authors@R:
    c(person("Davide", "Risso", role = "aut", email = "davide.risso@unipd.it"),
    person("Ludwig", "Geistlinger", role = c("aut", "cre"),
           email = "ludwig_geistlinger@hms.harvard.edu"),
    person("Marcel", "Ramos", role = "ctb",
           email = "marcel.ramos@sph.cuny.edu"),
    person("Dario", "Righelli", role = "ctb", email = "drighelli@gmail.com"))
Description: This tutorial aims to provide a solid foundation in using
    Bioconductor tools for single-cell RNA-seq analysis by walking through
    various steps of typical workflows using example datasets.
License: Artistic-2.0
Encoding: UTF-8
LazyData: true
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.1.0
Depends:
    R (>= 4.3.0)
Imports:
    AUCell,
    CuratedAtlasQueryR,
    DropletUtils,
    EnsDb.Mmusculus.v79,
    MouseGastrulationData,
    Seurat,
    SeuratData,
    SingleR,
    TENxBrainData,
    batchelor,
    scater,
    scran,
    scuttle,
    DropletUtils,
    EnsDb.Mmusculus.v79,
    batchelor,
    igraph,
    gridExtra,
    pheatmap,
    scDblFinder,
    zellkonverter,
    ggplot2,
    edgeR
Suggests:
    BiocStyle,
    dplyr,
    knitr,
    rmarkdown,
    stringr,
    pkgdown
Remotes:
    lgeistlinger/SeuratData,
    stemangiola/CuratedAtlasQueryR
URL:
    https://bioconductor.github.io/ISMB.OSCA/,
    ghcr.io/bioconductor/ismb.osca
BugReports: https://github.com/Bioconductor/ISMB.OSCA/issues/new/choose
VignetteBuilder: knitr
DockerImage: ghcr.io/bioconductor/ismb.osca:latest